Fitness data for PP_3661 in Pseudomonas putida KT2440

conserved membrane protein of unknown function, UPF0324 family
SEED: Putative membrane protein YeiH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.1 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -3.2 compare
carbon source D-Lysine 10 mM (C) -0.6 -3.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.6 -2.8 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.7 compare
nitrogen source Urea (N) -0.6 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.2 compare
carbon source Valerolactone (C) -0.6 -2.9 compare
carbon source D-Glucose (C) -0.5 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.5 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.1 compare
nitrogen source NAG (N) -0.4 -2.4 compare
carbon source L-Leucine (C) -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.8 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.4 compare