Fitness data for PP_3649 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Predicted regulator PutR for proline utilization, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.1)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -6.1 -4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -4.7 -6.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.6 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.3 -4.8 compare
carbon source D-Mannose (C) -4.0 -3.9 compare
carbon source Delta-Undecalactone (C) -4.0 -5.5 compare
carbon source L-Lysine 10 mM (C) -4.0 -4.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.8 -5.3 compare
carbon source Delta-Decalactone (C) -3.8 -5.7 compare
carbon source 3-methyl-1-butanol (C) -3.7 -5.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.6 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.5 -7.1 compare
carbon source Delta-Undecalactone (C) -3.5 -5.2 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -3.3 -5.1 compare
stress Geraniol 1 vol% -3.2 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.2 -5.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -3.2 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.2 -4.4 compare
carbon source Delta-Dodecalactone (C) -3.1 -5.2 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -3.1 -6.1 compare