Fitness data for PP_3618 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -1.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.9 -3.4 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.5 compare
stress R2A with Fusaric 480 ug/mL -0.7 -2.5 compare
nitrogen source Urea (N) -0.6 -1.9 compare
pH Valerolactone (C) pH 6.5 -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.6 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
pH pH 8 -0.6 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.6 -2.2 compare
carbon source Vanillin (C) -0.6 -1.9 compare
phage moi 100 Time6-phageFRS -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
nitrogen source nitrate (N) +0.6 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.6 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +1.3 compare
nitrogen source NAG (N); with MOPS +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare