Fitness data for PP_3603 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Predicted D-glucarate or D-galactorate regulator, GntR family
KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.2)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -3.8 -7.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.3 -6.3 compare
carbon source L-Lysine 10 mM (C) -3.1 -7.1 compare
carbon source L-Lysine (C) -2.9 -8.0 compare
carbon source L-Alanine (C) -2.9 -6.4 compare
carbon source L-Lysine (C) -2.8 -4.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.7 -5.7 compare
carbon source L-Lysine (C) -2.7 -7.7 compare
carbon source DL-3-Hydroxybutyric (C) -2.6 -7.1 compare
carbon source DL-3-Hydroxybutyric (C) -2.5 -6.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 -3.7 compare
carbon source 1,4-Butanediol (C) -2.4 -7.0 compare
carbon source Delta-Undecalactone (C) -2.4 -7.2 compare
carbon source Hexanoic (C) -2.4 -6.4 compare
carbon source ferulate (C); with MOPS -2.3 -5.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -2.2 -5.5 compare
carbon source Delta-Undecalactone (C) -2.2 -6.6 compare
carbon source 5-Aminovaleric 10 mM (C) +2.4 +11.7 compare
carbon source 5-Aminovaleric 10 mM (C) +2.8 +14.4 compare
carbon source Valerolactam 10 mM (C) +3.4 +20.0 compare