Fitness data for PP_3600 in Pseudomonas putida KT2440

glucarate transporter
SEED: D-galactarate permease
KEGG: MFS transporter, ACS family, glucarate transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Mucic (C) -4.6 -14.1 compare
carbon source Mucic (C) -4.4 -15.6 compare
carbon source D-Galacturonic Acid (C) -3.7 -7.8 compare
carbon source D-Galacturonic Acid (C) -3.3 -7.5 compare
carbon source Rhamnogalacturonan - from potato (C) -1.7 -9.6 compare
carbon source Rhamnogalacturonan - from potato (C) -1.3 -6.6 compare
carbon source D-Glucuronic gamma lactone (C) -0.7 -4.1 compare
carbon source D-Glucaric (C) -0.6 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.7 compare
carbon source D-Glucuronic gamma lactone (C) -0.6 -3.4 compare
carbon source D-Glucaric (C) -0.5 -3.2 compare
phage P. putida Missley MOI 0.1 -0.5 -1.6 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.6 compare
phage P. putida PUT 7 MOI 1 -0.4 -2.1 compare
carbon source D-Lysine 10 mM (C) -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.4 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.4 +1.8 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.4 compare