Fitness data for PP_3599 in Pseudomonas putida KT2440

5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data)
Original annotation: 5-dehydro-4-deoxyglucarate dehydratase
SEED: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
KEGG: 5-dehydro-4-deoxyglucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -6.2 -6.0 compare
carbon source D-Galacturonic Acid (C) -6.1 -6.0 compare
carbon source Mucic (C) -6.0 -5.9 compare
carbon source D-Glucuronic gamma lactone (C) -5.8 -7.9 compare
carbon source D-Glucuronic gamma lactone (C) -5.5 -8.5 compare
carbon source Mucic (C) -5.3 -8.9 compare
carbon source D-Glucaric (C) -5.3 -8.8 compare
carbon source D-Glucaric (C) -5.1 -7.8 compare
carbon source D-Glucuronic Acid (C) -3.5 -10.0 compare
carbon source Rhamnogalacturonan - from potato (C) -2.1 -8.3 compare
carbon source Rhamnogalacturonan - from potato (C) -1.5 -6.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.2 compare
phage P. putida PUT 7 MOI 1 -0.8 -3.3 compare
carbon source Octanoic (C) -0.7 -3.2 compare
carbon source Tween 20 (C) -0.6 -2.0 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare