Fitness data for PP_3593 in Pseudomonas putida KT2440

L-lysine and D-lysine ABC transporter, substrate-binding component (from data)
Original annotation: Amino acid ABC transporter, periplasmic binding protein
SEED: Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)

group	condition	fitness	t score
carbon source	L-Lysine (C)	-6.3	-9.7	compare
carbon source	L-Lysine (C)	-5.9	-8.2	compare
nitrogen source	D-Lysine (N)	-5.5	-13.7	compare
carbon source	L-Lysine (C)	-5.3	-11.4	compare
carbon source	D-Lysine 10 mM (C)	-5.1	-10.3	compare
carbon source	L-Lysine 10 mM (C)	-5.0	-10.2	compare
carbon source	D-Lysine 10 mM (C)	-4.9	-11.2	compare
nitrogen source	D-Lysine (N)	-4.1	-13.4	compare
nitrogen source	L-Lysine (N)	-2.2	-11.1	compare
nitrogen source	L-Lysine (N)	-1.9	-10.3	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8	-2.4	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.7	-2.1	compare
nitrogen source	nitrate (N)	-0.7	-2.0	compare
nitrogen source	L-Ornithine (N)	-0.6	-3.9	compare
temperature	Growth at 25C; with MOPS	-0.6	-2.4	compare
phage	P. putida PUT 7 MOI 1	-0.6	-2.2	compare
nitrogen source	L-Ornithine (N)	-0.5	-2.9	compare
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	+0.6	+2.7	compare
nitrogen source	Propandiamine (N)	+0.8	+3.8	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+1.4	compare