Fitness data for PP_3587 in Pseudomonas putida KT2440

lipid hydroperoxide peroxidase
SEED: Thiol peroxidase, Tpx-type (EC 1.11.1.15)
KEGG: thiol peroxidase, atypical 2-Cys peroxiredoxin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.4 -6.1 compare
carbon source 3-methyl-1-butanol (C) -2.9 -3.9 compare
carbon source 3-methyl-1-butanol (C) -2.5 -7.4 compare
phage P. putida Missley MOI 0.1 -1.4 -2.1 compare
phage P. putida Sci small MOI 0.1 -1.2 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -1.7 compare
phage P. putida PUT 7 MOI 1 -1.1 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -1.0 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.8 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.8 -2.8 compare
carbon source Valerolactone (C) -0.8 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
nitrogen source Ammonium chloride (N) +0.8 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.3 compare
nitrogen source Urea (N); with MOPS +0.8 +2.5 compare
pH Growth at pH7 and (C) Trisodium citrate +0.8 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +1.1 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.1 +1.8 compare