Fitness data for PP_3582 in Pseudomonas putida KT2440

RND efflux transporter, outer membrane protein
SEED: Heavy metal RND efflux outer membrane protein, CzcC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -0.9 -5.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -3.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -3.4 compare
carbon source Trisodium citrate (C) -0.6 -1.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.3 compare
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) -0.5 -2.8 compare
temperature Growth at 34C -0.5 -1.9 compare
nitrogen source Propandiamine (N) -0.5 -1.5 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.4 -2.0 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.7 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Met +0.5 +2.8 compare
pH Growth at pH8 and (C) D-Glucose +0.5 +1.8 compare
micoeukaryotes C.elegans, mixed culture-2 +0.5 +2.3 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
carbon source ferulate (C); with MOPS +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.7 compare
carbon source Valerolactone (C) +1.1 +1.4 compare