Fitness data for PP_3548 in Pseudomonas putida KT2440

multidrug efflux transport system - permease subunit
SEED: Inner membrane component of tripartite multidrug resistance system
KEGG: MFS transporter, DHA2 family, multidrug resistance protein B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source 3-Hydroxydecanoic (C) -0.4 -2.4 compare
carbon source Crotonic (C) -0.4 -2.1 compare
stress R2A with Fusaric 480 ug/mL -0.4 -2.6 compare
temperature Growth at 30C; with MOPS -0.4 -1.9 compare
temperature Growth at 25C -0.3 -1.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.3 -1.7 compare
stress R2A with Fusaric 240 ug/mL -0.3 -1.7 compare
nitrogen source Caprolactam (N) -0.3 -2.3 compare
phage P. putida PUT10 MOI 1 -0.3 -2.2 compare
nitrogen source NAG (N); with MOPS -0.3 -1.4 compare
nitrogen source DL-3-Aminoisobutyric (N) -0.3 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.3 +2.0 compare
phage P. put PUT 10 MOI 10 +0.3 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.1 compare
nitrogen source NAG (N); with MOPS +0.4 +2.1 compare