Fitness data for PP_3476 in Pseudomonas putida KT2440

Type II secretion system protein G
SEED: Predicted secretion system X protein GspG-like 2
KEGG: general secretion pathway protein G

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source carbon source 2-Deoxy-D-glucose 50 mM -1.4 -3.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -4.0 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.0 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -1.7 compare
carbon source carbon source Glycerol 108.6 mM -0.9 -3.8 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.9 -2.2 compare
pH pH 7 -0.9 -2.3 compare
pH pH 6 -0.9 -4.1 compare
carbon source Trisodium citrate (C) -0.9 -1.9 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.8 -2.6 compare
nitrogen source Ammonium chloride (N) -0.8 -2.4 compare
carbon source carbon source Bisabolol 45 mM -0.8 -3.4 compare
no phage control Time6-nophage -0.8 -2.7 compare
phage P. putida Sci small MOI 0.1 -0.8 -0.9 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.0 compare
carbon source D-Glucose (C) +0.9 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.0 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.5 compare