Fitness data for PP_3449 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Bacteriophage N4 adsorption protein A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -6.2 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -3.1 -1.5 compare
nitrogen source NAG (N) -2.3 -3.2 compare
nitrogen source Propandiamine (N) -2.3 -1.8 compare
nitrogen source Urea (N) -2.3 -1.8 compare
temperature shift Temperature shift 30_to_34; with MOPS -2.1 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.0 -2.3 compare
temperature shift Temperature shift 10_to_30 -1.9 -1.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.9 -1.9 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.7 -2.4 compare
no stress control Growth with no stress -1.6 -1.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -1.6 -2.0 compare
stress R2A with Fusaric 240 ug/mL -1.6 -1.3 compare
no phage control No phage control -1.4 -3.0 compare
carbon source Glucose (C) (20mM) -1.4 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.4 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.3 -2.2 compare
carbon source Oleic (C) -1.3 -2.1 compare
carbon source Nonanoic (C) +1.6 +4.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.8 +1.9 compare