Fitness data for PP_3445 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00954916: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature Growth at 25C -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -1.6 compare
carbon source acetate (C) -0.6 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
phage P. putida South MOI 0.1 -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
pH pH 6 +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.4 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.6 +1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.0 compare
carbon source carbon source Bisabolol 45 mM +0.6 +2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.6 +1.8 compare
carbon source D-Glucose (C) +0.7 +2.3 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.4 compare