Fitness data for PP_3444 in Pseudomonas putida KT2440

Glyoxalase family protein
SEED: PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein
KEGG: PhnB protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.3 -1.7 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.7 compare
carbon source Glucose (C) (40mM) -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +2.0 compare
pH pH 8 +0.7 +1.7 compare
carbon source D-Glucose (C); with MOPS +0.7 +2.7 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +2.2 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +3.3 compare
carbon source carbon source D-Glucose 55.5 mM +0.8 +2.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.9 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +2.7 compare