Fitness data for PP_3439 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)

group	condition	fitness	t score
carbon source	Nonanoic (C)	-0.8	-2.7	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.7	-2.7	compare
carbon source	Myristic (C)	-0.6	-1.5	compare
carbon source	carbon source D-Glucose 55.5 mM	-0.5	-1.8	compare
carbon source	5-Aminovaleric 10 mM (C)	-0.5	-2.6	compare
carbon source	L-Leucine (C)	-0.5	-1.8	compare
nitrogen source	Ammonium chloride (N)	-0.5	-1.8	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.5	-1.6	compare
carbon source	Protocatechuic Acid (C)	-0.5	-2.6	compare
carbon source	D,L-Malic Acid (C)	-0.5	-2.0	compare
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	+0.5	+1.7	compare
stress	Growth with Chloride 200 mM	+0.5	+1.8	compare
carbon source	ferulate (C); with MOPS	+0.5	+1.6	compare
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	+0.5	+2.9	compare
nitrogen source	NAG (N); with MOPS	+0.5	+2.0	compare
nitrogen source	Urea (N); with MOPS	+0.6	+2.3	compare
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+1.3	compare
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	+1.5	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.8	+1.4	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2	+1.9	compare