Fitness data for PP_3436 in Pseudomonas putida KT2440

chloramphenicol-sensitive protein
SEED: Protein rarD
KEGG: chloramphenicol-sensitive protein RarD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Beta-alanine (N) -2.5 -10.9 compare
nitrogen source Beta-alanine (N) -2.1 -9.0 compare
nitrogen source D-2-Aminobutyric (N) -1.4 -4.0 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -2.7 compare
carbon source Beta-alanine (C) -0.8 -3.1 compare
carbon source ferulate (C); with MOPS -0.8 -2.5 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -2.3 compare
carbon source ferulate (C); with MOPS -0.7 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.5 compare
stress NaCl stress 250 mM -0.6 -2.1 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.6 -1.9 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.6 compare
stress Geraniol 1 vol% -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -1.6 compare
phage P. put PUT 10 MOI 10 +0.6 +2.1 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +1.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.8 +1.4 compare