Fitness data for PP_3403 in Pseudomonas putida KT2440

putative Quercetin 2,3-dioxygenase
SEED: Pirin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.9 compare
carbon source Trisodium citrate (C) -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
carbon source Myristic (C) -0.6 -1.3 compare
stress R2A with Fusaric 240 ug/mL -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.8 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.9 compare
nitrogen source nitrate (N) -0.5 -1.7 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.1 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -2.1 compare
lb LB -0.4 -2.6 compare
carbon source Rhamnogalacturonan - from potato (C) -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
pH pH 5 +0.5 +1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +2.2 compare
phage P. putida Missley MOI 0.1 +0.6 +1.7 compare
nitrogen source nitrogen source nitrite 1mM +0.7 +3.0 compare