Fitness data for PP_3359 in Pseudomonas putida KT2440

putative Hydroxycinnamic acid degradation regulator
SEED: Transcriptional regulator, MarR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -3.3 -2.5 compare
carbon source 1,3-Butandiol (C) -2.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.9 -3.5 compare
carbon source DL-3-Hydroxybutyric (C) -2.6 -2.6 compare
pH D-Glucose (C) pH 7.5 -2.2 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.0 -3.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -2.0 -2.4 compare
pH D-Glucose (C) pH 6.5 -1.8 -2.0 compare
carbon source 2-Methylbutanoic (C) -1.7 -1.8 compare
carbon source benzoic (C) -1.6 -3.5 compare
carbon source 1,3-Hexanediol (C) -1.6 -1.9 compare
carbon source 2-Methylbutanoic (C) -1.5 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.6 +4.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +4.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.3 +4.7 compare
carbon source ferulate (C); with MOPS +2.5 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.6 +6.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.9 +6.2 compare