Fitness data for PP_3356 in Pseudomonas putida KT2440

p-coumarate CoA-ligase (EC 6.2.1.12) (from data)
Original annotation: feruloyl-CoA-synthetase
KEGG: feruloyl-CoA synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source p-Coumaric (C) -6.1 -14.1 compare
carbon source p-Coumaric (C) -5.3 -17.6 compare
carbon source ferulate (C); with MOPS -4.5 -15.4 compare
carbon source p-Coumaric (C) -4.2 -15.2 compare
carbon source Ferulic Acid (C) -4.1 -15.3 compare
carbon source ferulate (C); with MOPS -4.0 -14.3 compare
carbon source ferulate (C); with MOPS -3.9 -12.8 compare
carbon source p-Coumaric (C) -3.6 -16.1 compare
carbon source Ferulic Acid (C) -3.3 -16.1 compare
carbon source p-Coumaric (C) -2.3 -14.2 compare
temperature Growth at 30C; with MOPS -0.6 -3.4 compare
carbon source Myristic (C) -0.5 -2.3 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -2.3 compare
nitrogen source nitrate (N) -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -1.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.5 compare