Fitness data for PP_3328 in Pseudomonas putida KT2440

putative Ring-cleaving dioxygenase
SEED: ring-cleaving dioxygenase, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
pH pH 7 -3.0 -2.5 compare
pH pH 6 -2.1 -2.2 compare
nitrogen source Urea (N) -2.1 -1.4 compare
carbon source butyrate (C) -1.9 -1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -1.3 compare
carbon source D-Lysine 10 mM (C) -1.4 -2.2 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.3 -1.5 compare
pH pH 5 -1.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3 -1.3 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.2 -2.0 compare
carbon source Valeric (C) -1.2 -1.9 compare
stress Growth with Chloride 500 mM -1.2 -2.2 compare
phage P. put PUT 10 MOI 0.1 -1.2 -1.6 compare
pH Growth at pH6 and (C) Trisodium citrate -1.2 -0.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.3 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +1.1 compare
nitrogen source nitrogen source nitrite 1mM +1.7 +4.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.9 +5.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.9 +2.7 compare