Fitness data for PP_3302 in Pseudomonas putida KT2440

RND efflux transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Myristic (C) -0.5 -2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.8 compare
phage P. putida Missley MOI 0.1 -0.3 -1.4 compare
pH pH 7 -0.3 -1.6 compare
pH Valerolactone (C) pH 6.5 +0.3 +1.7 compare
carbon source 2-Methylbutanoic (C) +0.3 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +1.7 compare
stress Growth with Chloride 500 mM; with MOPS +0.3 +1.8 compare
phage PUT8 MOI 10 +0.3 +2.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +2.2 compare
phage PUT 8 MOI 1 +0.3 +1.6 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +1.9 compare
phage PUT8 MOI 0.1 +0.4 +2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +1.7 compare
nitrogen source nitrite (N) +0.4 +2.3 compare
stress Growth with Chloride 200 mM +0.4 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +2.2 compare