Fitness data for PP_3298 in Pseudomonas putida KT2440

CinA domain protein
SEED: CinA domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -0.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.2 compare
carbon source ferulate (C); with MOPS -0.6 -2.2 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.7 compare
temperature shift Temperature shift 10_to_30 -0.5 -1.9 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.4 -1.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
phage PUT8 MOI 10 +0.5 +2.9 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.7 compare