Fitness data for PP_3287 in Pseudomonas putida KT2440

transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family
SEED: transcriptional regulator, Crp/Fnr family
KEGG: CRP/FNR family transcriptional regulator, anaerobic regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -2.4 -3.8 compare
phage P. putida Sci small MOI 0.1 -1.3 -1.5 compare
phage P. putida Missley MOI 0.1 -1.3 -1.8 compare
phage P. putida Sci Big MOI 0.1 -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -3.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.9 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -1.8 compare
nitrogen source nitrate (N) -0.6 -1.7 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.3 compare
temperature shift Temperature shift 10_to_30 -0.6 -2.2 compare
carbon source D-Glucose (C) -0.6 -1.6 compare
stress R2A with Fusaric 240 ug/mL -0.6 -2.2 compare
carbon source ferulate (C); with MOPS -0.6 -1.1 compare
carbon source acetate (C) -0.5 -1.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.8 +1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +1.2 +8.5 compare