Fitness data for PP_3283 in Pseudomonas putida KT2440

1,2-epoxyphenylacetyl-CoA isomerase
SEED: Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)
KEGG: enoyl-CoA hydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Phenylacetic (C) -6.4 -8.6 compare
carbon source Phenylacetic (C) -4.8 -6.8 compare
phage P. putida Sci small MOI 0.1 -1.3 -2.0 compare
phage P. putida Sci Big MOI 0.1 -1.2 -2.3 compare
phage P. putida PUT 7 MOI 1 -1.0 -2.4 compare
phage PUT 8 MOI 1 -0.9 -1.5 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.3 compare
nitrogen source nitrogen source nitrite 1mM -0.8 -2.2 compare
nitrogen source NAG (N); with MOPS -0.7 -1.3 compare
carbon source D-Lysine 10 mM (C) -0.7 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.5 compare
nitrogen source NAG (N); with MOPS -0.6 -1.0 compare
nitrogen source nitrogen source nitrate 5mM -0.6 -2.2 compare
nitrogen source nitrite (N) +0.6 +2.5 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.6 +2.5 compare
pH pH 8 +0.6 +1.9 compare
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement +0.6 +3.6 compare
carbon source D-Glucose (C) +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.2 compare