Fitness data for PP_3278 in Pseudomonas putida KT2440

ring 1,2-phenylacetyl-CoA epoxidase alpha subunit
SEED: Phenylacetate-CoA oxygenase, PaaG subunit
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Phenylacetic (C) -5.8 -8.7 compare
carbon source Phenylacetic (C) -3.5 -5.7 compare
phage P. putida Sci Big MOI 0.1 -1.6 -2.4 compare
phage P. putida Missley MOI 0.1 -1.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -4.0 compare
stress Growth with Chloride 500 mM -1.0 -3.1 compare
pH Valerolactone (C) pH 6.5 -0.9 -2.7 compare
temperature Growth at 30C; with MOPS -0.8 -1.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.7 -1.7 compare
carbon source L-Phenylalanine 5 mM (C) -0.7 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -2.4 compare
carbon source Delta-Decalactone (C) -0.6 -2.4 compare
temperature Growth at 34C -0.6 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -0.8 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +2.4 compare
nitrogen source nitrogen source nitrite 1mM +0.9 +2.6 compare