Fitness data for PP_3276 in Pseudomonas putida KT2440

ring 1,2-phenylacetyl-CoA epoxidase beta subunit
SEED: Phenylacetate-CoA oxygenase, PaaI subunit
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Phenylacetic (C) -7.3 -7.1 compare
carbon source Phenylacetic (C) -4.5 -7.5 compare
phage P. putida PUT 7 MOI 1 -1.9 -2.3 compare
carbon source D-Glucose (C) -1.8 -4.6 compare
phage P. putida Missley MOI 0.1 -1.3 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -3.3 compare
carbon source D-Glucose (C); with MOPS -1.1 -1.8 compare
carbon source acetate (C) -1.0 -1.8 compare
temperature shift Temperature shift 10_to_21 -0.9 -4.2 compare
stress Growth with Chloride 500 mM -0.9 -3.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -1.6 compare
nitrogen source nitrate (N) -0.9 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.0 compare
nitrogen source Urea (N) -0.8 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -2.2 compare
stress Growth with Chloride 500 mM; with MOPS -0.8 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.7 compare
temperature shift Temperature shift 10_to_30 -0.8 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -1.3 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.9 +3.4 compare