Fitness data for PP_3272 in Pseudomonas putida KT2440

acetate permease
SEED: Acetate permease ActP (cation/acetate symporter)
KEGG: cation/acetate symporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Phenylacetic (C) -6.5 -16.2 compare
carbon source Phenylacetic (C) -3.5 -10.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.7 compare
phage P. putida Missley MOI 0.1 -0.4 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.8 compare
nitrogen source Ammonium chloride and TNT (N) -0.4 -2.7 compare
nitrogen source Ammonium chloride (N) -0.3 -2.4 compare
r2a control R2A control -0.3 -2.0 compare
nitrogen source Ammonium chloride (N) -0.3 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -2.1 compare
nitrogen source nitrogen source nitrite 1mM -0.3 -1.3 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.7 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare