Fitness data for PP_3253 in Pseudomonas putida KT2440

Carboxylate-amine ligase PP_3253
SEED: FIG074102: hypothetical protein
KEGG: carboxylate-amine ligase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.7 compare
phage P. putida Sci small MOI 0.1 -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.3 compare
carbon source Crotonic (C) -0.6 -2.4 compare
temperature Growth at 30C; with MOPS -0.5 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.5 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.6 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.5 compare
nitrogen source Hydantoin (N) +0.4 +1.1 compare
nitrogen source Urea (N); with MOPS +0.4 +2.0 compare
stress R2A with Fusaric 240 ug/mL +0.4 +1.9 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.4 +2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.5 compare
pH Valerolactone (C) pH 6.5 +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
carbon source ferulate (C); with MOPS +0.6 +2.3 compare