Fitness data for PP_3143 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source L-Serine (N) -1.9 -4.2 compare
nitrogen source NAG (N); with MOPS -1.8 -2.1 compare
nitrogen source L-Serine (N) -1.8 -4.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.6 compare
nitrogen source Hippuric (N) -0.9 -2.6 compare
pH Valerolactone (C) pH 6.5 -0.9 -1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -2.3 compare
phage P. putida PUT10 MOI 10 +0.8 +3.5 compare
phage P. putida Sci small MOI 0.1 +0.8 +1.6 compare
phage P. putida South MOI 0.1 +0.8 +3.0 compare
phage P. putida PUT10 MOI 1 +0.8 +3.0 compare
phage P. putida South MOI 0.1 +0.8 +3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8 +2.2 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +1.7 compare
carbon source carbon source D-Glucose 55.5 mM +0.9 +2.5 compare
phage P. putida South MOI 10 +0.9 +3.4 compare
phage P. putida South MOI 1 +0.9 +4.3 compare
phage P. putida Sci Big MOI 0.1 +1.0 +2.3 compare
pH pH 7 +1.0 +3.5 compare