Fitness data for PP_3120 in Pseudomonas putida KT2440

methylglyoxal reductase
SEED: 2,5-diketo-D-gluconic acid reductase (EC 1.1.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.4 compare
nitrogen source nitrogen source nitrite 1mM -0.8 -2.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.7 -3.5 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -2.1 compare
pH Growth at pH7 and (C) D-Glucose -0.7 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -1.6 compare
carbon source 3-Hydroxydecanoic (C) -0.6 -2.1 compare
temperature shift Temperature shift 30_to_25 -0.6 -2.0 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -2.1 compare
carbon source D-Lysine 10 mM (C) -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.8 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -1.9 compare
stress Cholinium alpha ketoglutarate 10 vol% +0.5 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.7 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.7 compare