Fitness data for PP_3095 in Pseudomonas putida KT2440

Protein ClpV1
SEED: ClpB protein
KEGG: type VI secretion system protein VasG

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.1 -3.6 compare
nitrogen source 2,6-diaminopimelic (N) -1.1 -2.6 compare
pH pH 9 -0.9 -3.1 compare
phage P. putida Sci Big MOI 0.1 -0.9 -2.5 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.8 -3.3 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.8 -2.9 compare
carbon source Valerolactone (C) -0.7 -2.6 compare
temperature shift Temperature shift 30_to_10 -0.7 -3.6 compare
nitrogen source Ammonium chloride (N); with MOPS -0.7 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.7 -2.8 compare
phage P. putida PUT 7 MOI 1 -0.7 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.6 -2.0 compare
nitrogen source nitrogen source Ammonium chloride 20mM -0.6 -3.4 compare
carbon source L-Lysine (C) -0.6 -2.1 compare
nitrogen source Propandiamine (N) -0.6 -2.1 compare
nitrogen source nitrate (N) -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.1 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -2.5 compare