Fitness data for PP_3092 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein conserved in bacteria
KEGG: type VI secretion system protein ImpK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -3.0 compare
phage P. putida PUT 7 MOI 1 -0.7 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.2 compare
phage PUT 8 MOI 1 -0.7 -1.7 compare
temperature Growth at 25C -0.7 -1.9 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.3 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.9 compare
carbon source Valeric (C) -0.5 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.5 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.5 compare
carbon source Myristic (C) -0.5 -1.3 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.4 -0.9 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.0 compare
carbon source Ethyl decanoate (C) -0.4 -2.4 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5 +1.8 compare
stress 1-Pentanol 0.3 vol% +0.5 +2.8 compare
nitrogen source 3,5-Dinitrosalicylic (N) +0.5 +1.6 compare
phage PUT8 MOI 0.1 +0.5 +2.1 compare