Fitness data for PP_3066 in Pseudomonas putida KT2440

Pyocin R2_PP, lytic enzyme
SEED: FIG101079: Lytic enzyme
KEGG: putative chitinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.0 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.4 -1.8 compare
stress 3-methyl-1-butanol 0.4 vol% -0.4 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3 -2.2 compare
carbon source Valerolactam (C) -0.3 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.9 compare
pH pH 9 +0.3 +1.3 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.3 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.4 compare
phage P. putida Sci Big MOI 0.1 +0.4 +1.6 compare
carbon source Valerolactone (C) +0.4 +1.8 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.1 compare
carbon source D-Glucose (C) +0.4 +2.0 compare
pH pH 6 +0.4 +1.7 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.9 compare