Fitness data for PP_3051 in Pseudomonas putida KT2440

Pyocin R2_PP, tail spike protein
SEED: Baseplate assembly protein V

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -2.4 compare
pH Growth at pH8 and (C) D-Glucose -1.3 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.3 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -2.3 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.1 -2.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -2.3 compare
phage P. putida PUT 7 MOI 1 -0.9 -1.8 compare
pH Growth at pH8 and (C) Trisodium citrate -0.9 -3.1 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.9 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.8 -2.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.9 +2.1 compare
temperature Growth at 30C +0.9 +2.6 compare
temperature shift Temperature shift 10_to_25; with MOPS +1.0 +3.6 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +1.0 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.3 +3.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.4 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.6 compare