Fitness data for PP_3024 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.9 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.0 compare
pH pH 9 -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.4 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.7 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.0 compare
pH D-Glucose (C) pH 6.5 -0.6 -2.1 compare
nitrogen source DL-2-Aminobutyric (N) +0.6 +3.9 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.7 +2.6 compare
phage PUT8 MOI 0.1 +0.7 +1.8 compare
pH Valerolactone (C) pH 6.5 +0.7 +2.4 compare
pH Growth at pH9 and (C) Trisodium citrate +0.7 +1.9 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.8 +2.7 compare
pH Growth at pH6 and (C) D-Glucose +0.8 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8 +3.2 compare
phage PUT8 MOI 10 +0.8 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +3.7 compare
stress 1-Pentanol 0.3 vol% +2.2 +11.0 compare
stress 3-methyl-1-butanol 0.4 vol% +2.6 +12.6 compare