Fitness data for PP_3018 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00954899: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.2 -1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.9 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.9 -2.7 compare
carbon source Valerolactone (C) -0.9 -2.0 compare
carbon source 3-Hydroxydecanoic (C) -0.8 -1.6 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.8 -2.1 compare
carbon source 4-Aminobutyric 10 mM (C) +0.8 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.0 compare
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) +0.9 +3.1 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +1.4 compare
carbon source acetate (C) +0.9 +3.0 compare
pH Growth at pH6 and (C) Trisodium citrate +0.9 +3.0 compare
pH Growth at pH6 and (C) D-Glucose +0.9 +2.3 compare
carbon source BC Lignin Sorghum 10 vol% (C) +0.9 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.9 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +1.0 +1.9 compare
pH pH 7 +1.0 +2.6 compare
phage P. putida Sci small MOI 0.1 +1.0 +1.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM +1.1 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +1.1 +2.2 compare