Fitness data for PP_3013 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00965062: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.3 -2.0 compare
carbon source ferulate (C); with MOPS -2.3 -3.6 compare
pH Growth at pH6 and (C) Trisodium citrate -1.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -2.2 compare
nitrogen source Urea (N) -1.1 -2.3 compare
carbon source Rhamnogalacturonan - from potato (C) -1.1 -4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -2.0 compare
carbon source D-Lysine 10 mM (C) -0.8 -3.0 compare
nitrogen source no extra (N); with MOPS -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.1 compare
stress Growth with Chloride 200 mM -0.7 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -2.4 compare
nitrogen source Urea (N); with MOPS +0.7 +2.1 compare
phage PUT 8 MOI 1 +0.7 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.0 +1.9 compare