Fitness data for PP_2987 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Transcriptional regulator, HxlR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.1 -1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.0 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -3.3 compare
temperature shift Temperature shift 30_to_25 -0.9 -2.3 compare
nitrogen source NAG (N); with MOPS -0.9 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -3.2 compare
carbon source D-Glucose (C) -0.8 -2.3 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.8 -2.7 compare
nitrogen source Urea (N) -0.8 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -1.2 compare
temperature Growth at 30C; with MOPS -0.8 -1.7 compare
nitrogen source Ammonium chloride (N) -0.8 -1.8 compare
phage P. put PUT 10 MOI 10 -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.9 compare
carbon source D-Mannose (C) -0.8 -4.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.2 compare
phage P. putida Sci Big MOI 0.1 +1.0 +2.2 compare
pH pH 9 +1.2 +3.1 compare