Fitness data for PP_2970 in Pseudomonas putida KT2440

conserved exported protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.1 -3.7 compare
carbon source D-Glucose (C) -1.8 -2.8 compare
carbon source Trisodium citrate (C) -1.8 -2.1 compare
phage P. putida PUT 7 MOI 1 -1.7 -2.1 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -1.6 -2.5 compare
phage P. putida Sci Big MOI 0.1 -1.5 -2.0 compare
nitrogen source NAG (N); with MOPS -1.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3 -1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.2 -1.3 compare
carbon source D-Glucose (C); with MOPS -1.1 -1.6 compare
nitrogen source no extra (N); with MOPS -1.1 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -1.9 compare
nitrogen source nitrogen source nitrite 0.5mM +1.1 +2.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.1 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.1 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.1 +2.5 compare
stress R2A with Fusaric 240 ug/mL +1.2 +3.6 compare
stress R2A with Fusaric 240 ug/mL +1.3 +4.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.5 +1.7 compare