Fitness data for PP_2925 in Pseudomonas putida KT2440

malate:quinone oxidoreductase
SEED: Malate:quinone oxidoreductase (EC 1.1.5.4)
KEGG: malate dehydrogenase (quinone)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.0 -2.5 compare
phage P. putida South MOI 0.1 -0.7 -2.9 compare
pH pH 8 -0.7 -1.9 compare
nitrogen source nitrite (N) -0.7 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.2 compare
stress R2A with Fusaric 240 ug/mL -0.6 -1.9 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.2 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.1 compare
carbon source 5-Aminovaleric 10 mM (C) -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -1.6 compare
r2a control R2A control -0.5 -2.3 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5 -1.7 compare
nitrogen source TNT (N) +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.0 compare
nitrogen source Ammonium chloride (N) +0.6 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.3 compare