Fitness data for PP_2919 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Cys regulon transcriptional activator CysB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Butyrolactam (N) -4.6 -11.5 compare
nitrogen source Butyrolactam (N) -3.8 -7.7 compare
nitrogen source Propiolactam (N) -3.2 -5.4 compare
nitrogen source Propiolactam (N) -2.7 -4.5 compare
nitrogen source nitrate (N) -0.8 -2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -1.6 compare
nitrogen source Urea (N); with MOPS -0.6 -1.8 compare
nitrogen source Propandiamine (N) -0.6 -2.4 compare
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement -0.5 -2.1 compare
carbon source L-Lysine (C) -0.5 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5 +1.5 compare
phage P. putida Sci Big MOI 0.1 +0.5 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +1.8 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.3 compare