Fitness data for PP_2881 in Pseudomonas putida KT2440

Oxidoreductase, short chain dehydrogenase/reductase family
SEED: Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.0 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -2.8 compare
phage P. putida Missley MOI 0.1 -0.6 -1.1 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -2.9 compare
nitrogen source no extra (N); with MOPS -0.6 -2.7 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.5 -2.5 compare
carbon source L-Lysine (C) -0.4 -1.8 compare
nitrogen source nitrogen source nitrate 20mM +0.4 +2.1 compare
carbon source 4-Aminobutyric 10 mM (C) +0.4 +1.8 compare
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) +0.4 +2.7 compare
carbon source D-Glucose (C) +0.5 +1.9 compare
nitrogen source Ammonium chloride (N); with MOPS +0.5 +2.3 compare
carbon source D-Glucose (C) +0.5 +2.2 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.5 +2.1 compare
carbon source 5-Aminovaleric 10 mM (C) +0.5 +2.7 compare
carbon source BC Lignin Sorghum 20 vol% (C) +0.5 +2.7 compare
nitrogen source Hippuric (N) +0.5 +3.1 compare
temperature shift Temperature shift 30_to_10 +0.5 +2.4 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.4 compare