Fitness data for PP_2879 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: FIG00955694: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.3 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6 -2.0 compare
phage P. putida PUT 7 MOI 1 -0.5 -2.2 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.5 -3.0 compare
no stress control Growth with no stress -0.5 -1.3 compare
carbon source D-Glucose (C) +0.5 +1.9 compare
no stress control Growth with no stress +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +2.7 compare
carbon source Lignin Monomers (C) +0.5 +2.8 compare
carbon source ferulate (C); with MOPS +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
carbon source butyrate (C) +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.6 +2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.7 compare