Fitness data for PP_2877 in Pseudomonas putida KT2440

putative osmotic pressure-regulated transporter
SEED: Sodium/bile acid symporter family
KEGG: solute carrier family 10 (sodium/bile acid cotransporter), member 7

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.4 -2.5 compare
carbon source ferulate (C); with MOPS -0.8 -3.1 compare
pH pH 6 -0.6 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -3.0 compare
stress R2A with Fusaric 480 ug/mL -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
carbon source butyrate (C) -0.5 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
carbon source Valeric (C) -0.5 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.3 compare
phage P. putida PUT 7 MOI 1 -0.4 -1.2 compare
nitrogen source nitrogen source nitrate 5mM +0.4 +1.3 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.5 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.5 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5 +2.1 compare