Fitness data for PP_2841 in Pseudomonas putida KT2440

Site-specific recombinase, phage integrase family
SEED: Site-specific recombinase, phage integrase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -1.5 compare
nitrogen source nitrogen source nitrate 5mM -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.7 compare
nitrogen source NAG (N); with MOPS -0.6 -1.4 compare
carbon source Octanoic (C) -0.6 -2.5 compare
stress Growth with Chloride 200 mM; with MOPS -0.5 -1.4 compare
carbon source Tween 20 (C) -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.0 compare
temperature shift Temperature shift 30_to_25 -0.5 -1.5 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
stress Growth with Chloride 500 mM; with MOPS +0.8 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.7 compare