Fitness data for PP_2826 in Pseudomonas putida KT2440

Transcriptional regulator MexT
SEED: Transcriptional regulator MexT

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -4.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.4 -4.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.3 -2.8 compare
temperature shift Temperature shift 10_to_30 -1.2 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.1 -1.8 compare
carbon source L-Lysine (C) -1.1 -2.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.1 -1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -1.1 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.9 compare
nitrogen source nitrogen source nitrite 1mM -0.9 -1.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.8 compare
stress R2A with Fusaric 240 ug/mL +1.0 +4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.0 +3.3 compare
pH pH 8 +1.0 +1.2 compare
temperature Growth at 30C; with MOPS +1.0 +2.7 compare
carbon source D-Glucose (C) +1.0 +3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.2 +1.7 compare
carbon source Crotonic (C) +1.2 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.4 +1.8 compare