Fitness data for PP_2820 in Pseudomonas putida KT2440

HTH-type transcriptional regulator nfxB
SEED: Transcriptional regulator NfxB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.1 vol% (C) -5.5 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.7 -2.5 compare
nitrogen source D-2-Aminobutyric (N) -3.5 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.4 -3.4 compare
nitrogen source D-2-Aminobutyric (N) -3.2 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.1 -4.1 compare
carbon source Vanillin (C) -3.0 -2.8 compare
nitrogen source spermidine (N) -2.8 -6.3 compare
carbon source 3-methyl-1-butanol (C) -2.8 -5.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.8 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.7 -2.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -2.7 -3.5 compare
carbon source 1,3-Hexanediol (C) -2.7 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.7 -1.7 compare
carbon source Vanillin (C) -2.7 -2.3 compare
pH pH 6 -2.6 -2.6 compare
nitrogen source Hippuric (N) -2.4 -3.8 compare
pH Growth at pH7 and (C) D-Glucose -2.4 -3.2 compare
nitrogen source Hippuric (N) -2.4 -3.7 compare
carbon source 1,3-Hexanediol (C) -2.4 -4.7 compare