Fitness data for PP_2818 in Pseudomonas putida KT2440

Multidrug efflux RND transporter MexD
SEED: Multidrug efflux RND transporter MexD
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Delta-Undecalactone (C) -2.3 -11.3 compare
carbon source Delta-Undecalactone (C) -1.7 -11.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -3.8 compare
carbon source Delta-Decalactone (C) -0.6 -3.8 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.6 -3.5 compare
carbon source Delta-Decalactone (C) -0.6 -3.7 compare
stress R2A with Fusaric 480 ug/mL -0.5 -2.8 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -2.1 compare
temperature Growth at 25C; with MOPS -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.4 compare
temperature shift Temperature shift 30_to_25 -0.4 -2.2 compare
nitrogen source no extra (N); with MOPS -0.4 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
phage PUT 8 MOI 1 -0.4 -1.6 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -2.0 compare
stress Growth with Chloride 500 mM -0.4 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -0.3 -1.5 compare
stress Growth with Chloride 500 mM -0.3 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare