Fitness data for PP_2814 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.1 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -2.7 compare
nitrogen source nitrate (N) -1.0 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.9 compare
phage P. putida Sci small MOI 0.1 -0.8 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.6 compare
carbon source D-Glucose (C); with MOPS -0.8 -2.6 compare
nitrogen source Urea (N); with MOPS -0.8 -1.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.8 -1.4 compare
phage P. putida Sci Big MOI 0.1 -0.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -1.7 compare
nitrogen source Ammonium chloride (N); with MOPS -0.7 -1.5 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.9 compare
pH Growth at pH7 and (C) D-Glucose +0.7 +2.5 compare
pH Growth at pH7 and (C) Trisodium citrate +0.7 +2.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.0 +2.7 compare