Fitness data for PP_2790 in Pseudomonas putida KT2440

Sigma-54 dependent sensory box protein
SEED: Propionate catabolism operon regulatory protein PrpR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 4-Hydroxyvalerate (C) (40mM) -5.6 -5.5 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -4.7 -9.0 compare
carbon source Levulinic Acid (C) -4.7 -6.6 compare
carbon source Levulinic Acid (C) -4.6 -6.3 compare
carbon source Levulinic Acid (C) -4.5 -9.3 compare
carbon source Levulinic Acid (C) -3.5 -8.7 compare
phage P. putida Missley MOI 0.1 -1.2 -3.0 compare
phage P. putida Sci small MOI 0.1 -0.9 -2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -3.3 compare
phage P. put South MOI 10 -0.6 -1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -3.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.4 compare
carbon source Delta-Decalactone (C) -0.6 -2.6 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.0 compare
carbon source ferulate (C); with MOPS -0.5 -2.0 compare
carbon source Tween 20 (C) +0.5 +2.0 compare
phage PUT8 MOI 10 +0.6 +1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.6 +3.0 compare
pH pH 9 +0.6 +2.1 compare
pH pH 8 +0.7 +2.5 compare